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Author:
None
Summary:
computer vision for image-based phenotyping of single cells
Latest version:
0.4.0
Required dependencies:
anndata
|
iohub
|
jsonargparse
|
kornia
|
lightning
|
matplotlib
|
monai
|
numpy
|
pytorch-metric-learning
|
scikit-image
|
tensorboard
|
timm
|
torch
|
wandb
|
xarray
Optional dependencies:
captum
|
cellpose
|
cmap
|
dash
|
gradio
|
graphviz
|
hypothesis
|
imbalanced-learn
|
ipykernel
|
joblib
|
jupyter
|
jupytext
|
mahotas
|
napari
|
nbformat
|
onnxruntime
|
phate
|
plotly
|
pre-commit
|
ptflops
|
pydantic
|
pytest
|
pytest-cov
|
ruff
|
scikit-learn
|
seaborn
|
torchmetrics
|
torchview
|
transformers
|
umap-learn
|
viscy
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