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Author:
Michael E. Vinyard
License:
MIT
Summary:
scDiffEq: modeling single-cell dynamics using neural differential equations.
Latest version:
1.1.4
Required dependencies:
abcparse
|
adata-query
|
anndata
|
autodevice
|
cell-neighbors
|
cell-perturb
|
cellplots
|
geomloss
|
h5py
|
lightning
|
matplotlib
|
neural-diffeqs
|
numpy
|
pandas
|
plotly
|
pykeops
|
pyyaml
|
requests
|
scanpy
|
scikit-learn
|
scipy
|
statsmodels
|
torch
|
torch-adata
|
torch-nets
|
torchsde
|
tqdm
Optional dependencies:
autodoc
|
ipykernel
|
ipython
|
jupyter
|
jupyterlab
|
myst-parser
|
nbsphinx
|
numpy
|
pillow
|
psutil
|
pydata-sphinx-theme
|
pytest
|
scikit-learn
|
sphinx
|
sphinx-autodoc-typehints
|
sphinx-copybutton
|
sphinx-design
|
sphinx-favicon
|
sphinxcontrib-napoleon
|
umap-learn
|
wandb
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