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scanpy


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Author: Alex Wolf, Philipp Angerer, Fidel Ramirez, Isaac Virshup, Sergei Rybakov, Gokcen Eraslan, Tom White, Malte Luecken, Davide Cittaro, Tobias Callies, Marius Lange, Andrés R. Muñoz-Rojas
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Summary: Single-Cell Analysis in Python.
Latest version: 1.8.1
Required dependencies: anndata | h5py | importlib_metadata | joblib | matplotlib | natsort | networkx | numba | numpy | packaging | pandas | patsy | scikit-learn | scipy | seaborn | sinfo | statsmodels | tables | tqdm | umap-learn
Optional dependencies: bbknn | black | cudf | cugraph | cuml | dask | docutils | flit_core | fsspec | harmonypy | leidenalg | louvain | magic-impute | profimp | pytest | pytest-nunit | python-igraph | pytoml | scanorama | scanpydoc | scikit-misc | scrublet | setuptools_scm | sphinx | sphinx-autodoc-typehints | sphinx-rtd-theme | typing_extensions | zappy | zarr

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