scanpy

PyPI page
Home page
Author: Alex Wolf, Philipp Angerer, Fidel Ramirez, Isaac Virshup, Sergei Rybakov, Gokcen Eraslan, Tom White, Malte Luecken, Davide Cittaro, Tobias Callies, Marius Lange, Andrés R. Muñoz-Rojas
Summary: Single-Cell Analysis in Python.
Latest version: 1.11.1
Required dependencies: anndata | h5py | joblib | legacy-api-wrap | matplotlib | natsort | networkx | numba | numpy | packaging | pandas | patsy | pynndescent | scikit-learn | scipy | seaborn | session-info2 | statsmodels | tqdm | typing-extensions | umap-learn
Optional dependencies: bbknn | cudf | cugraph | cuml | dask | dask-ml | harmonypy | hatch-vcs | igraph | ipython | leidenalg | louvain | magic-impute | matplotlib | myst-nb | myst-parser | nbsphinx | pre-commit | profimp | pytest | pytest-cov | pytest-mock | pytest-randomly | pytest-rerunfailures | pytest-xdist | readthedocs-sphinx-search | sam-algorithm | scanorama | scanpydoc | scikit-image | scikit-misc | setuptools | sphinx | sphinx-autodoc-typehints | sphinx-book-theme | sphinx-copybutton | sphinx-design | sphinx-tabs | sphinxcontrib-bibtex | sphinxext-opengraph | towncrier | zappy | zarr

Downloads last day: 3,744
Downloads last week: 49,774
Downloads last month: 224,862