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Author:
None
License:
GNU GENERAL PUBLIC LICENSE
Version 3, 29 June 2007
Copyright (C) 2007 Free Software Foundation, Inc. <https://fsf.org/>
Everyone is permitted ...
Summary:
OmicVerse: A single pipeline for exploring the entire transcriptome universe
Latest version:
2.1.2
Required dependencies:
adjusttext
|
anndata
|
datetime
|
igraph
|
ipywidgets
|
joblib
|
marsilea
|
matplotlib
|
mcp
|
multiprocess
|
networkx
|
numba
|
numpy
|
omicverse-notebook
|
omicverse-skills
|
openai
|
pandas
|
plotly
|
requests
|
scanpy
|
scikit-image
|
scikit-learn
|
scikit-misc
|
scipy
|
seaborn
|
statsmodels
|
tqdm
|
transformers
|
zarr
Optional dependencies:
anndata
|
anndataoom
|
arviz
|
beautifulsoup4
|
boltons
|
cytoolz
|
discord.py
|
dynamo-release
|
einops
|
ete3
|
frozendict
|
gdown
|
graphtools
|
httpx
|
ktplotspy
|
leidenalg
|
lifelines
|
memento-de
|
metatime
|
mofax
|
nbformat
|
numpy
|
omicclaw
|
pandas
|
pertpy
|
pillow
|
pydeseq2
|
pygam
|
pygithub
|
pymupdf
|
pytest
|
pytest-asyncio
|
python-telegram-bot
|
requests
|
s3fs
|
scikit-bio
|
scvi-tools
|
squidpy
|
tangram-sc
|
tensorboard
|
tomli
|
torchdr
|
toytree
|
wandb
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