PyPI page
Author:
Zehua Zeng
License:
GNU GENERAL PUBLIC LICENSE
Version 3, 29 June 2007
Copyright (C) 2007 Free Software Foundation, Inc. <https://fsf.org/>
Everyone is permitted ...
Summary:
OmicVerse: A single pipeline for exploring the entire transcriptome universe
Latest version:
2.3.2
Required dependencies:
adjusttext
|
anndata
|
datetime
|
igraph
|
ipywidgets
|
joblib
|
legendkit
|
marsilea
|
matplotlib
|
multiprocess
|
networkx
|
numba
|
numpy
|
omicverse-notebook
|
omicverse-skills
|
openai
|
pandas
|
patsy
|
plotly
|
requests
|
scanpy
|
scikit-image
|
scikit-learn
|
scikit-misc
|
scipy
|
seaborn
|
statsmodels
|
tqdm
|
transformers
|
zarr
Optional dependencies:
anndata
|
anndataoom
|
arviz
|
beautifulsoup4
|
biopython
|
biotite
|
boltons
|
causaldag
|
chembl-webresource-client
|
cobra
|
cytoolz
|
discord-py
|
dna-features-viewer
|
dnachisel
|
dynamo-release
|
einops
|
equilibrator-api
|
ete3
|
fair-esm
|
flowio
|
frozendict
|
gdown
|
gemmi
|
geopandas
|
graphtools
|
httpx
|
huggingface-hub
|
kaleido
|
ktplotspy
|
lazyslide
|
leidenalg
|
lifelines
|
lightgbm
|
logomaker
|
matplotlib-venn
|
mcp
|
mdtraj
|
meeko
|
memento-de
|
metatime
|
mofax
|
nbformat
|
numpy
|
omegaconf
|
omicclaw
|
openff-toolkit
|
openmm
|
openmmforcefields
|
optlang
|
ostir
|
pandas
|
pertpy
|
pillow
|
pot
|
primer3-py
|
py3dmol
|
pyalakazam
|
pycoloc
|
pycytotrace-bio
|
pydecontx
|
pydeqms
|
pydeseq2
|
pydestiny-bio
|
pydowser
|
pyfastcar
|
pygam
|
pygithub
|
pygliph
|
pygoslin
|
pyimmunarch
|
pyimputelcmd
|
pyldsc
|
pylipidr
|
pymatrixeqtl
|
pymclustr
|
pymfuzz
|
pymonocle3-bio
|
pymsstats
|
pymupdf
|
pyolinkanalyze
|
pyproda
|
pysccdc
|
pyscdrs
|
pyscoper
|
pyscorpius
|
pyshazam
|
pysoupx
|
pysusie
|
pytest
|
pytest-asyncio
|
python-telegram-bot
|
pytigger
|
pytometry
|
pytorch-lightning
|
pytscan
|
pytwas
|
pytwosamplemr
|
pyurd-bio
|
rdkit
|
requests
|
s3fs
|
sbol2
|
scikit-bio
|
scikit-misc
|
scvi-tools
|
seqfold
|
shapely
|
spatialdata
|
squidpy
|
statsmodels
|
straindesign
|
tangram-sc
|
tensorboard
|
tiffslide
|
timm
|
tomli
|
torch
|
torch-geometric
|
torchdr
|
toytree
|
transformers
|
viennarna
|
vina
|
wandb
|
wsidata
Downloads last day:
44
Downloads last week:
433
Downloads last month:
1,345
7-day smoothing