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Author:
Maciej Wiatrak
Summary:
Modeling bacterial genomes.
Latest version:
0.2.0
Required dependencies:
accelerate
|
biopython
|
dataclasses-json
|
datasets
|
einops
|
hf-xet
|
igraph
|
leidenalg
|
pandas
|
pyarrow
|
scanpy
|
session-info
|
tensorboardx
|
torch
|
torchmetrics
|
transformers
|
typed-argument-parser
Optional dependencies:
coverage
|
docutils
|
faesm
|
faiss-cpu
|
flash-attn
|
ipykernel
|
ipython
|
ipywidgets
|
jupyterlab
|
myst-nb
|
pandas
|
pre-commit
|
pytest
|
setuptools
|
sphinx
|
sphinx-autodoc-typehints
|
sphinx-book-theme
|
sphinx-copybutton
|
sphinx-tabs
|
sphinxcontrib-bibtex
|
sphinxext-opengraph
|
twine
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