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Author:
TerminatorJ
Summary:
A single-cell foundation model focus on the spatial cell-cell colocalization and subcellular mulecular co-occurrence
Latest version:
0.1.8
Required dependencies:
anndata
|
communities
|
datasets
|
networkx
|
numpy
|
pandas
|
peft
|
pyarrow
|
pytorch_lightning
|
scanpy
|
scikit-learn
|
scipy
|
statsmodels
|
transformers
|
wandb
Optional dependencies:
scanpy
|
sim-fish
|
torch_geometric
|
umap
|
umap-learn
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