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Author:
Zineb Sordo, Daniela Ushizima, Peter Andeer, James Sethian and Trent Northen.
License:
MIT license
Summary:
Segmentation pipeline for EcoFAB images
Latest version:
0.0.22
Required dependencies:
cachetools
|
constants
|
contourpy
|
einops
|
graphviz
|
imagecodecs
|
imageio
|
joblib
|
lightning
|
lightning-cloud
|
lightning-utilities
|
matplotlib
|
monai
|
neptune
|
nibabel
|
numpy
|
opencv-python
|
pandas
|
pillow
|
pytorch-lightning
|
scikit-image
|
scikit-learn
|
tensorboard
|
torch
|
torchaudio
|
torchdata
|
torchmetrics
|
torchtext
|
torchvision
|
torchviz
|
tqdm
|
versioneer
|
wandb
|
wheel
Optional dependencies:
autodocs
|
codecov
|
myst-nb
|
myst-parser
|
pytest
|
pytest-cov
|
sphinx
|
sphinx-panels
|
sphinx-rtd-theme
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