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Author:
Rafael Tubelleza
License:
MIT
Summary:
A Python package for the inteRactive and Integrated analySis of Multiplexed tissue microarrays
Latest version:
0.1.7
Required dependencies:
cellpose
|
dask
|
forestplot
|
harmonypy
|
imagecodecs
|
kneed
|
magicgui
|
matplotlib
|
napari
|
napari_matplotlib
|
napari_spatialdata
|
numpy
|
phenograph
|
pycomplexheatmap
|
pyometiff
|
qtpy
|
requests
|
scanpy
|
scikit-image
|
scikit-learn
|
scikit-survival
|
spatialdata
|
spatialdata-plot
|
squidpy
|
xarray
Optional dependencies:
dask-cudf-cu12
|
ipykernel
|
ipython
|
myst-nb
|
myst-parser
|
napari
|
pytest
|
pytest-cov
|
pytest-lazy-fixtures
|
pytest-qt
|
qtpy
|
rapids-singlecell
|
sphinx
|
sphinx-autodoc-typehints
|
sphinx-book-theme
|
sphinx-copybutton
|
sphinx-qt-documentation
|
sphinx-tabs
|
sphinxcontrib-bibtex
|
sphinxext-opengraph
|
tox
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