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Author:
Amir Hossein Hosseini Akbarnejad, Sebastian Birk
License:
BSD 3-Clause License
Copyright (c) 2024, Sebastian Birk
All rights reserved.
Redistribution and use in source and binary forms, with or without
modifi...
Summary:
Microenvironment-induced and INtrinsic Transcriptomic FLOWs
Latest version:
0.2.0
Required dependencies:
anndata
|
gdown
|
ipython
|
linformer-pytorch
|
pillow
|
pyyaml
|
scib-metrics
|
scikit-learn
|
scipy
|
scvi-tools
|
spatialdata
|
squidpy
|
torch
|
torch-geometric
|
torchcfm
|
torchdyn
|
wandb
|
zarr
Optional dependencies:
coverage
|
docutils
|
ipykernel
|
ipython
|
jupyterlab
|
myst-nb
|
myst-parser
|
pandas
|
pre-commit
|
pytest
|
sphinx
|
sphinx-autodoc-typehints
|
sphinx-book-theme
|
sphinx-copybutton
|
sphinx-design
|
sphinx-hoverxref
|
sphinx-rtd-theme
|
sphinxcontrib-bibtex
|
sphinxext-opengraph
|
twine
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