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Author:
GPBench Contributors
License:
MIT
Summary:
A benchmarking toolkit for genomic prediction with multiple methods and LLM-powered analysis
Latest version:
1.2.2
Required dependencies:
aiohttp
|
aislib
|
annotated-types
|
anyio
|
cmaes
|
coverage
|
dashscope
|
diskcache
|
distro
|
einops
|
filelock
|
flaml
|
flatbuffers
|
fsspec
|
h5py
|
httpcore
|
httpx
|
huggingface-hub
|
joblib
|
keras
|
langchain-core
|
langchain-openai
|
langgraph
|
langgraph-checkpoint
|
langgraph-prebuilt
|
langgraph-sdk
|
langsmith
|
lightgbm
|
lightning
|
lightning-utilities
|
matplotlib
|
ml-dtypes
|
mpmath
|
networkx
|
numpy
|
openai
|
opt-einsum
|
optuna
|
orjson
|
ormsgpack
|
pandas
|
pandas-plink
|
patsy
|
platformdirs
|
protobuf
|
psutil
|
pydantic
|
pydantic-core
|
pyecharts
|
pynndescent
|
pyro-api
|
pyro-ppl
|
pytest
|
pytest-cov
|
python-dotenv
|
pytorch-lightning
|
pyyaml
|
requests
|
requests-toolbelt
|
rich
|
rich-argparse
|
rpy2
|
safetensors
|
scikit-learn
|
scipy
|
seaborn
|
simplejson
|
statsmodels
|
swanlab
|
sympy
|
tenacity
|
tensorboard
|
tensorboard-data-server
|
tensorflow
|
threadpoolctl
|
tiktoken
|
tokenizers
|
torch
|
torchmetrics
|
torchvision
|
tqdm
|
transformers
|
triton
|
typing-extensions
|
typing-inspection
|
umap-learn
|
xarray
|
xgboost
|
xlsxwriter
|
xxhash
Optional dependencies:
autogen-agentchat
|
black
|
boto3
|
botocore
|
docker
|
flake8
|
mypy
|
nvidia-cublas-cu12
|
nvidia-cuda-cupti-cu12
|
nvidia-cuda-nvrtc-cu12
|
nvidia-cuda-runtime-cu12
|
nvidia-cudnn-cu12
|
nvidia-cufft-cu12
|
nvidia-cufile-cu12
|
nvidia-curand-cu12
|
nvidia-cusolver-cu12
|
nvidia-cusparse-cu12
|
nvidia-cusparselt-cu12
|
nvidia-ml-py
|
nvidia-nccl-cu12
|
nvidia-nvjitlink-cu12
|
nvidia-nvtx-cu12
|
s3transfer
|
swanlab
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