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Author:
Aerts lab @ VIB.AI
License:
Academic Non-commercial Software License Agreement
The Licensed Software is developed by and on behalf of the Laboratory of Computational Biology of VIB-KU Leuven and is owned by VIB ...
Summary:
CREsted: Cis-Regulatory Element Sequence Training, Explanation, and Design
Latest version:
1.8.1
Required dependencies:
anndata
|
keras
|
logomaker
|
loguru
|
memelite
|
numpy
|
pandas
|
pooch
|
pybigtools
|
pysam
|
scikit-learn
|
scipy
|
seaborn
|
tqdm
|
wandb
Optional dependencies:
anndata
|
coverage
|
docutils
|
ipykernel
|
ipython
|
lxml
|
modisco-lite
|
myst-nb
|
pandas
|
pre-commit
|
pytest
|
pytest-cov
|
ruff
|
scanpy
|
sphinx
|
sphinx-autodoc-typehints
|
sphinx-book-theme
|
sphinx-copybutton
|
sphinxcontrib-bibtex
|
sphinxext-opengraph
|
tensorflow
|
twine
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