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Author:
None
Summary:
An integrated tool for annotating the motif variation and complex patterns in tandem repeats.
Latest version:
0.4.2
Required dependencies:
anndata
|
biopython
|
edlib
|
igraph
|
ipywidgets
|
kaleido
|
leidenalg
|
matplotlib
|
nbformat
|
networkx
|
numba
|
numpy
|
pandas
|
parasail
|
plotly
|
polars
|
pooch
|
pyahocorasick
|
pyarrow
|
pybktree
|
pysam
|
scikit-learn
|
scipy
|
screed
|
seaborn
|
sourmash
|
tqdm
Optional dependencies:
build
|
myst-nb
|
myst_parser
|
pytest
|
scanpydoc
|
sphinx
|
sphinx-autodoc-typehints
|
sphinx-book-theme
|
sphinx-design
|
sphinx-rtd-theme
|
sphinxcontrib-bibtex
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