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Author:
Seppe De Winter
License:
Academic Non-commercial Software License Agreement
The Licensed Software is developed by and on behalf of the Laboratory of Computational Biology of VIB-KU Leuven and is owned by VIB ...
Summary:
TF-MInDi: Transcription Factor Motifs and Instances Discovery
Latest version:
1.2.0
Required dependencies:
anndata
|
h5py
|
igraph
|
itaxotools-mafftpy
|
lda
|
logomaker
|
matplotlib
|
memelite
|
numba
|
numpy
|
pandas
|
pooch
|
pybigwig
|
scanpy
|
scipy
|
seaborn
|
session-info2
Optional dependencies:
coverage
|
cudf-cu12
|
cugraph-cu12
|
cuml-cu12
|
cupy-cuda12x
|
docutils
|
ipykernel
|
ipython
|
myst-nb
|
pandas
|
pre-commit
|
pytest
|
rapids-singlecell
|
setuptools
|
sphinx
|
sphinx-autodoc-typehints
|
sphinx-book-theme
|
sphinx-copybutton
|
sphinx-tabs
|
sphinxcontrib-bibtex
|
sphinxext-opengraph
|
twine
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