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Author:
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Summary:
Pan-cancer detection of T-cell clonal expansion from single-cell RNA sequencing (CUDA-enabled)
Latest version:
0.4.6
Required dependencies:
anndata
|
bbknn
|
fire
|
igraph
|
lightgbm
|
matplotlib
|
optuna
|
plotly
|
pooch
|
pydantic
|
scanpy
|
scikit-learn
|
scirpy
|
scrublet
|
seaborn
|
shap
|
structlog
|
tabulate
|
tensorboard
|
torch
|
tqdm
Optional dependencies:
colorama
|
cruft
|
docutils
|
ipykernel
|
ipython
|
ipywidgets
|
jupyter
|
jupyter-client
|
jupyter-core
|
myst-nb
|
myst-parser
|
pre-commit
|
pytest
|
pytest-cov
|
pytest-xdist
|
ruff
|
sphinx
|
sphinx-autobuild
|
sphinx-autodoc-typehints
|
sphinx-book-theme
|
sphinx-copybutton
|
sphinxcontrib-bibtex
|
sphinxext-opengraph
|
watchdog
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