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Author:
Junbum Kim
Summary:
Scientific analysis tools for spatial and single-cell multiomics
Latest version:
0.1.0
Required dependencies:
anndata
|
dask
|
matplotlib
|
numpy
|
pandas
|
pillow
|
pingouin
|
scanpy
|
scikit-learn
|
scipy
|
seaborn
|
squidpy
|
statannotations
|
statsmodels
|
tifffile
|
tqdm
Optional dependencies:
cellpose
|
decoupler
|
gseapy
|
harmonypy
|
ipykernel
|
marsilea
|
myst-nb
|
plotly
|
pydata-sphinx-theme
|
pytest
|
pytest-cov
|
pyucell
|
rapids-singlecell
|
ruff
|
scib-metrics
|
scikit-image
|
scvi-tools
|
sphinx
|
sphinx-autodoc-typehints
|
sphinx-copybutton
|
sphinx-design
|
stardist
|
tangram-sc
|
torch
|
utag
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