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Author:
None
License:
MIT
Summary:
Custom modules for single cell analysis
Latest version:
0.14.2
Required dependencies:
anndata
|
apybiomart
|
beartype
|
boto3
|
deprecation
|
ipympl
|
ipython
|
ipywidgets
|
jinja2
|
kneed
|
matplotlib
|
matplotlib_venn
|
numba
|
numpy
|
openpyxl
|
packaging
|
pandas
|
plotly
|
pptreport
|
psutil
|
pysam
|
python-gitlab
|
pyyaml
|
qnorm
|
requests
|
scanpy
|
scipy
|
scrublet
|
seaborn
|
statsmodels
|
throttler
|
tqdm
|
upsetplot
Optional dependencies:
anndata2ri
|
bbknn
|
click
|
gseapy
|
harmonypy
|
igraph
|
liana
|
mudata
|
networkx
|
peakqc
|
pybedtools
|
pycirclize
|
pydeseq2
|
pygenometracks
|
rpy2
|
scanorama
|
scfates
|
scikit-learn
|
tobias
|
uropa
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