PyPI page
Author:
Taobo Hu
Summary:
Xenium I/O, multimodal analysis, topology workflows, contour-native spatial profiling, GMI inference, mechanostress analysis, and optional external workflow bridges.
Latest version:
0.4.7
Required dependencies:
aiohttp
|
anndata
|
click
|
fsspec
|
imagecodecs
|
matplotlib
|
numpy
|
pandas
|
pillow
|
pyarrow
|
pyyaml
|
requests
|
scanpy
|
scikit-learn
|
scipy
|
seaborn
|
shapely
|
statsmodels
|
tifffile
|
zarr
Optional dependencies:
build
|
geopandas
|
ipykernel
|
lazyslide
|
myst-nb
|
myst-parser
|
nbclient
|
nbformat
|
pydata-sphinx-theme
|
pytest
|
pytest-cov
|
spatialperturb
|
sphinx
|
sphinx-copybutton
|
sphinx-design
|
tiffslide
|
twine
|
wsidata
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