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Author:
Vladimir Shitov
License:
BSD 3-Clause License
Copyright (c) 2023, Vladimir Shitov
All rights reserved.
Redistribution and use in source and binary forms, with or without
modif...
Summary:
A toolbox for patient or sample representation from single-cell data
Latest version:
0.15.2
Required dependencies:
anndata
|
ehrapy
|
gudhi
|
matplotlib
|
numpy
|
opentsne
|
pandas
|
plottable
|
scipy
|
seaborn
Optional dependencies:
coverage
|
cuml
|
cupy
|
diffusionemd
|
docutils
|
helical
|
hydra-core
|
ipykernel
|
ipython
|
lightning
|
mixmil
|
myst-nb
|
nbsphinx
|
pandas
|
pertpy
|
phate
|
pilotpy
|
pre-commit
|
pynndescent
|
pytest
|
pytest-cov
|
s3fs
|
scarches
|
scvi-tools
|
setuptools
|
sphinx
|
sphinx-autodoc-typehints
|
sphinx-book-theme
|
sphinx-copybutton
|
sphinx-design
|
sphinx-tabs
|
sphinxcontrib-bibtex
|
sphinxext-opengraph
|
torch
|
twine
|
wassersteintsne
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