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Author:
Nathan Sheffield
License:
BSD2
Summary:
Genomic interval toolkit
Latest version:
0.8.4
Required dependencies:
genomicranges
|
gtars
|
iranges
|
logmuse
|
numpy
|
peppy
|
pyarrow
|
pybiocfilecache
|
pyyaml
|
requests
|
rich
|
s3fs
|
safetensors
|
ubiquerg
|
zarr
Optional dependencies:
anndata
|
black
|
fastembed
|
gensim
|
hmmlearn
|
huggingface_hub
|
isort
|
langchain-huggingface
|
paramiko
|
pybigwig
|
pytest
|
pytest-mock
|
pytest-remotedata
|
qdrant_client
|
ruff
|
scanpy
|
scipy
|
torch
|
transformers
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