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Author:
Chen-Rui Xia
License:
MIT
Summary:
Quantifying predictability of gene expression from histology image
Latest version:
0.3.0
Required dependencies:
annoy
|
faiss-cpu
|
ipython
|
leidenalg
|
lightgbm
|
loguru
|
numpy
|
pynndescent
|
pyyaml
|
scanpy
|
scikit-misc
|
scipy
Optional dependencies:
black
|
einops
|
isort
|
jupyter_contrib_nbextensions
|
jupyterlab
|
jupytext
|
nbformat
|
opencv-python
|
openslide-bin
|
openslide-python
|
patchworklib
|
pre-commit
|
py-spy
|
pytest
|
pytest-cov
|
pytest-sugar
|
pytest-xdist
|
pytorch-lightning
|
ray
|
scikit-image
|
tbb
|
torch
|
torchaudio
|
torchvision
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