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Author:
Gabriele Partel
Summary:
Deep learning for single-cell Gene Regulatory Networks
Latest version:
0.2.0
Required dependencies:
anndata
|
matplotlib
|
mudata
|
networkx
|
numpy
|
pandas
|
pooch
|
pyarrow
|
pybiomart
|
pyfaidx
|
requests
|
scanpy
|
scikit-learn
|
scipy
|
seaborn
|
torch
|
torch-geometric
|
tqdm
Optional dependencies:
debugpy
|
docutils
|
enformer-pytorch
|
ipykernel
|
ipython
|
ipywidgets
|
myst-nb
|
pandas
|
pre-commit
|
pytest
|
ruff
|
setuptools
|
sphinx
|
sphinx-autodoc-typehints
|
sphinx-book-theme
|
sphinx-copybutton
|
sphinx-tabs
|
sphinxcontrib-bibtex
|
sphinxext-opengraph
|
twine
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