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Author:
CellType Agent Team
License:
MIT License
Copyright (c) 2025 CellType Agent Team
Permission is hereby granted, free of charge, to any person obtaining a copy
of this software and associate...
Summary:
统一的细胞类型分析工具包，集成四个专业Agent提供完整的细胞类型注释流程
Latest version:
1.0.1
Required dependencies:
aiofiles
|
anndata
|
asyncio-mqtt
|
babel
|
click
|
fastapi
|
fastmcp
|
filetype
|
gseapy
|
h5py
|
httpx
|
jsonschema
|
loguru
|
mcp
|
numpy
|
openpyxl
|
pandas
|
pathlib2
|
psutil
|
pydantic
|
pydantic-settings
|
python-dateutil
|
python-i18n
|
pytz
|
pyyaml
|
requests
|
rich
|
scanpy
|
scipy
|
tables
|
tqdm
|
typing-extensions
|
uvicorn
|
websockets
Optional dependencies:
biopython
|
bioservices
|
black
|
celltypeagent
|
celltypist
|
dask
|
diskcache
|
docker
|
flake8
|
gunicorn
|
joblib
|
matplotlib
|
mypy
|
numba
|
plotly
|
pytest
|
pytest-asyncio
|
pytest-cov
|
rpy2
|
ruff
|
scikit-learn
|
seaborn
|
torch
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