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Author:
Zhijian Li
License:
MIT License
Copyright (c) 2024, Zhijian Li
Permission is hereby granted, free of charge, to any person obtaining a copy
of this software and associated docume...
Summary:
Inferring multi-scale gene regulatory networks
Latest version:
0.13
Required dependencies:
anndata
|
captum
|
matplotlib
|
moods-python
|
mudata
|
muon
|
numpy
|
pandas
|
polars
|
pooch
|
pybigwig
|
pyfaidx
|
pyjaspar
|
pyranges
|
pysam
|
pytorch-lightning
|
scanpy
|
session-info
|
torch
|
vcfpy
Optional dependencies:
coverage
|
docutils
|
ipykernel
|
ipython
|
myst-nb
|
pre-commit
|
pycomplexheatmap
|
pytest
|
setuptools
|
sphinx
|
sphinx-autodoc-typehints
|
sphinx-book-theme
|
sphinx-copybutton
|
sphinx-tabs
|
sphinxcontrib-bibtex
|
sphinxext-opengraph
|
twine
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