alphadia

PyPI page
Home page
Author: None
License: Apache License Version 2.0, January 2004 http://www.apache.org/licenses/ TERMS AND CONDITIONS FOR USE, REPRODUCTI...
Summary: A novel proteomics search engine for DIA data based on end-to-end transfer learning.
Latest version: 2.1.1
Required dependencies: alphabase | alphadia-search-rs | alpharaw | alphatims | argparse | directlfq | llvmlite | numpy | nvidia-cublas-cu12 | nvidia-cuda-cupti-cu12 | nvidia-cuda-nvrtc-cu12 | nvidia-cuda-runtime-cu12 | nvidia-cudnn-cu12 | nvidia-cufft-cu12 | nvidia-curand-cu12 | nvidia-cusolver-cu12 | nvidia-cusparse-cu12 | nvidia-cusparselt-cu12 | nvidia-nccl-cu12 | nvidia-nvjitlink-cu12 | nvidia-nvtx-cu12 | pandas | peptdeep | pyarrow | quantselect | rocket_fft | scipy | seaborn | torch | torchmetrics | transformers | triton | xxhash
Optional dependencies: alphabase | alphadia-search-rs | alpharaw | alphatims | argparse | biopython | certifi | cffi | charset-normalizer | click | clr-loader | contextlib2 | contourpy | coverage | coverage-badge | cycler | dill | directlfq | filelock | fonttools | fsspec | furo | h5py | huggingface-hub | idna | jinja2 | joblib | kiwisolver | lightning-utilities | llvmlite | lxml | markupsafe | matplotlib | mpmath | multiprocess | myst_parser | nbmake | nbsphinx | networkx | numba | numpy | packaging | pandas | pandoc | peptdeep | pillow | pre-commit | psutil | pyahocorasick | pyarrow | pycparser | pyparsing | pyteomics | pytest | python-dateutil | pythonnet | pyyaml | pyzstd | quantselect | rdkit | regex | requests | rocket-fft | safetensors | scikit-learn | scipy | seaborn | setuptools | six | sphinx-rtd-theme | sphinx_design | sympy | threadpoolctl | tokenizers | torchmetrics | tqdm | transformers | typing-extensions | tzdata | urllib3 | uv | xxhash

Downloads last day: 37
Downloads last week: 172
Downloads last month: 436