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Author:
Einar Birnir Olafsson
Summary:
Spatial phenotype analysis of crisp screens (SpaCr)
Latest version:
1.3.1
Required dependencies:
adjusttext
|
aicspylibczi
|
biopython
|
bottleneck
|
brokenaxes
|
btrack
|
captum
|
cellpose
|
customtkinter
|
czifile
|
fastremap
|
gdown
|
gpustat
|
gputil
|
huggingface-hub
|
imageio
|
ipykernel
|
ipython
|
ipywidgets
|
keyring
|
lxml
|
mahotas
|
matplotlib
|
matplotlib_venn
|
monai
|
nd2reader
|
numexpr
|
numpy
|
openai
|
opencv-python-headless
|
openpyxl
|
pandas
|
pillow
|
pingouin
|
protobuf
|
psutil
|
pyautogui
|
pylibczirw
|
pytz
|
pywavelets
|
rapidfuzz
|
readlif
|
scikit-image
|
scikit-learn
|
scikit-posthocs
|
scipy
|
screeninfo
|
seaborn
|
segment-anything
|
segmentation_models_pytorch
|
shap
|
statsmodels
|
tables
|
tifffile
|
torch
|
torch-geometric
|
torchcam
|
torchvision
|
tqdm
|
trackpy
|
transformers
|
ttf_opensans
|
ttkthemes
|
umap-learn
|
wandb
|
xgboost
Optional dependencies:
opencv-python
|
opencv-python-headless
|
pytest
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