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License:
BSD 3-Clause License
Summary:
Python toolkit for fast genotype I/O, ancestry analysis, population-genetics statistics, genotype QC, GWAS, and visualization
Latest version:
1.1.1
Required dependencies:
adjusttext
|
cairosvg
|
joblib
|
matplotlib
|
nbformat
|
numpy
|
pandas
|
pandas-stubs
|
pgenlib
|
plotly
|
plotly-express
|
polars
|
scikit-learn
|
tqdm
|
zstandard
Optional dependencies:
bgen
|
cyvcf2
|
furo
|
hail
|
memory-profiler
|
myst-nb
|
myst-parser
|
notebook
|
pandas-plink
|
pgenlib
|
plinkio
|
pygrgl
|
pysam
|
pysnptools
|
pytest
|
pytest-benchmark
|
pytest-cov
|
pyvcf3
|
scikit-allel
|
sgkit
|
sphinx
|
sphinx-copybutton
|
sphinx-design
|
sphinx-sitemap
|
torch
|
tox
|
zarr
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