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Author:
Slimani Floric
Summary:
Open source package deploying a complete quantification pipeline for analysis of sequential smFish images. Raw data can then be analysed by custom means or with out of the bow analysis pipelined provided.
Latest version:
1.2.2
Required dependencies:
af-eraser
|
big-fish-reloaded
|
czifile
|
igraph
|
leidenalg
|
lxml
|
magicgui
|
matplotlib
|
napari
|
numpy
|
ome-types
|
openpyxl
|
pandas
|
pebble
|
prince
|
scikit-image
|
scikit-learn
|
scipy
|
smfishtools
|
tqdm
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