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Author:
LSD Development Team
Summary:
Latent State Dynamics (LSD) for single-cell trajectory inference via neural ODE gradient flow
Latest version:
0.3.0
Required dependencies:
anndata
|
cellrank
|
leidenalg
|
matplotlib
|
numpy
|
pandas
|
pyro-ppl
|
scanpy
|
scikit-learn
|
scipy
|
seaborn
|
torch
|
torchdiffeq
|
tqdm
|
umap-learn
Optional dependencies:
black
|
furo
|
mypy
|
myst-parser
|
nbsphinx
|
pre-commit
|
pytest
|
pytest-cov
|
ruff
|
sphinx
|
sphinx-autodoc-typehints
|
sphinx-copybutton
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