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Author:
Ekin Kahraman
Summary:
Rust and PyO3 implementation of SCENIC-style regulatory-network analysis. Includes GRN, AUCell, topics, cistarget, peak calling, cell QC, enhancer-gene links, and eRegulon assembly. Installs without dask, Java, or CUDA.
Latest version:
0.5.0
Required dependencies:
anndata
|
numpy
|
pandas
|
pyarrow
|
scipy
Optional dependencies:
anndata
|
arboreto
|
ctxcore
|
gensim
|
igraph
|
leidenalg
|
psutil
|
pyscenic
|
scanpy
|
scikit-learn
|
setuptools
|
tomotopy
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