PyPI page
Author:
Catherine Chahrour
Summary:
Dataset generation and peak calling for multi-modal Next-Generation Sequencing data
Latest version:
0.4.9
Required dependencies:
bamnado
|
dask
|
dask-ml
|
loguru
|
matplotlib
|
numpy
|
pandas
|
plotnado
|
pybigwig
|
pydeseq2
|
pyranges1
|
pysam
|
pytest
|
scikit-allel
|
seaborn
|
sparse
|
tqdm
|
typer
|
xarray
|
zarr
Optional dependencies:
ipykernel
|
jupyterlab
|
mkdocs
|
mkdocs-jupyter
|
mkdocs-material
|
mkdocstrings
|
mkdocstrings-python
|
numba
|
pymdown-extensions
|
pytest
|
pytest-cov
|
pytest-xdist
|
ruff
|
scipy
|
torch
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