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Author:
Tristan Whitmarsh
License:
MIT + Commons Clause
Summary:
Cross-platform viewer and analysis application for multiplexed (IMC) and H&E OME-TIFF images
Latest version:
0.1.5
Required dependencies:
anndata
|
cellpose
|
csbdeep
|
deepcell
|
deepcell-toolbox
|
deepcell-tracking
|
edt
|
einops
|
fastremap
|
fill-voids
|
geopandas
|
h5py
|
igraph
|
imagecodecs
|
instanseg-torch
|
leidenalg
|
louvain
|
mahotas
|
matplotlib
|
mgen
|
multiplex2brightfield
|
natsort
|
ncolor
|
numcodecs
|
numpy
|
omnipose
|
opencv-python-headless
|
pandas
|
peakdetect
|
phenograph
|
pillow
|
protobuf
|
psutil
|
pyarrow
|
pyside6
|
pywin32
|
roifile
|
scanpy
|
scikit-image
|
scikit-learn
|
scipy
|
seaborn
|
setuptools
|
shapely
|
spektral
|
stardist
|
tensorflow
|
tensorflow-addons
|
tensorflow-io-gcs-filesystem
|
tifffile
|
torch
|
torchvf
|
torchvision
|
tqdm
|
umap-learn
|
zarr
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