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Author:
Mari Tolonen, Jakub Sedzinski
License:
BSD 3-Clause License
Copyright (c) 2020, Varun Kapoor
All rights reserved.
Redistribution and use in source and binary forms, with or without
modifica...
Summary:
Hierarchical, composable segmentation for biological image data (clean rewrite of VollSeg).
Latest version:
1.0.2
Required dependencies:
careamics
|
cellpose
|
h5py
|
huggingface_hub
|
lightning
|
numpy
|
omegaconf
|
scikit-image
|
scipy
|
tifffile
|
torch
|
tqdm
Optional dependencies:
csbdeep
|
kapoorlabs-curvature-napari
|
kapoorlabs-vollseg-napari
|
pytest
|
pytest-cov
|
ruff
|
stardist
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