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Author:
None
License:
GPL-3.0
Summary:
Genomics research toolkit for jointly embedding Hi-C 3D chromatin contact matrices into the same vector space
Latest version:
1.0.5
Required dependencies:
bioframe
|
cooler
|
cooltools
|
cython
|
datashader
|
leidenalg
|
matplotlib
|
numpy
|
pandas
|
pyarrow
|
pybbi
|
pydantic
|
scikit-learn
|
umap-learn
Optional dependencies:
black
|
hatch
|
isort
|
jupyter
|
jupyter-black
|
jupyterlab
|
plotly
|
pre-commit
|
pytest
|
pytest-cov
|
pytest-mock
|
ruff
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