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Author:
Austin A. Varela
License:
MIT License
Summary:
Tools to quantify GIFT-seq datasets.
Latest version:
0.6.1
Required dependencies:
anndata
|
biopython
|
h5py
|
matplotlib
|
numpy
|
openpyxl
|
pandas
|
prefixtrie
|
rapidfuzz
|
rich-argparse
|
sankeyflow
|
scipy
|
tqdm
Optional dependencies:
adjusttext
|
geopandas
|
griffe-inherited-docstrings
|
griffe-sphinx
|
igraph
|
leidenalg
|
logomaker
|
markdown-exec
|
mkdocs-api-autonav
|
mkdocs-autorefs
|
mkdocs-awesome-nav
|
mkdocs-awesome-pages-plugin
|
mkdocs-git-revision-date-localized-plugin
|
mkdocs-jupyter
|
mkdocs-material
|
mkdocs-open-in-new-tab
|
mkdocs-panzoom-plugin
|
mkdocstrings
|
numba
|
protobuf
|
pyfamsa
|
pymdown-extensions
|
scanpy
|
scikit-learn
|
scoring-matrices
|
spatialdata
|
spatialdata-plot
|
squidpy
|
termynal
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