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Author:
None
License:
MIT
Summary:
Official DeepLife Python toolkit on PyPI: TwinCell (`deeplife_toolkit.twincell`), pseudo-bulk (`deeplife_toolkit.pseudobulk`), differential expression (`deeplife_toolkit.differential_expression`). Optional `[notebook]` extra for Jupyter; bundled tutorials under `deeplife_toolkit.notebooks`.
Latest version:
0.2.3
Required dependencies:
anndata
|
boto3
|
decoupler
|
dotenv
|
gseapy
|
h5py
|
hdf5plugin
|
httpx
|
hydra-core
|
ipykernel
|
ipywidgets
|
kaleido
|
networkx
|
numpy
|
omegaconf
|
pandas
|
plotly
|
pyarrow
|
pydantic
|
pydeseq2
|
pyyaml
|
scanpy
|
tenacity
|
tqdm
Optional dependencies:
adjusttext
|
comm
|
gseapy
|
ipython
|
six
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