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Author:
Xinpeng Zhang, Haidong Yi, Le Huang, Jinfang Zheng, Qiwei Ge, Tanner Yohe
License:
GNU GENERAL PUBLIC LICENSE
Version 3, 29 June 2007
Copyright (C) 2007 Free Software Foundation, Inc. <http://fsf.org/>
Everyone is permitted t...
Summary:
updated standalone version of dbCAN annotation tool for automated CAZyme annotation
Latest version:
5.2.8
Required dependencies:
bcbio-gff
|
biopython
|
importlib-metadata
|
matplotlib
|
openpyxl
|
pandas
|
psutil
|
pycirclize
|
pyhmmer
|
pyrodigal
|
pysam
|
requests
|
rich-click
|
seaborn
|
session-info
|
tqdm
Optional dependencies:
coverage
|
docutils
|
ipykernel
|
ipython
|
myst-nb
|
pkginfo
|
pre-commit
|
pytest
|
pytest-cov
|
pytest-html
|
pytest-xdist
|
setuptools-scm
|
sphinx
|
sphinx-argparse
|
sphinx-autodoc-typehints
|
sphinx-book-theme
|
sphinx-click
|
sphinx-copybutton
|
sphinx-design
|
sphinx-issues
|
sphinx-rtd-theme
|
sphinxcontrib-bibtex
|
sphinxext-opengraph
|
twine
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