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Author:
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License:
MIT License Copyright (c) 2022 CAJAL authors Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to dea...
Summary:
A library for multi-modal cell morphology analyses using Gromov-Wasserstein (GW) distance.
Latest version:
1.5
Required dependencies:
cython
|
futhark-ffi
|
igraph
|
leidenalg
|
mpltern
|
navis
|
numpy
|
pathos
|
pillow
|
pot
|
potpourri3d
|
pynndescent
|
python-louvain
|
scikit-dimension
|
scikit-image
|
scipy
|
tifffile
|
tqdm
|
trimesh
Optional dependencies:
black
|
flake8
|
ipywidgets
|
mpltern
|
mypy
|
myst_parser
|
navis
|
nbsphinx
|
networkx
|
numba
|
pandas
|
plotly
|
pre-commit
|
pytest
|
scanpy
|
sphinx
|
sphinx_rtd_theme
|
umap-learn
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