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Author:
Pedro Ribeiro
Summary:
mia-style microbiome toolkit for Python on AnnData/TreeData
Latest version:
0.5.0
Required dependencies:
anndata
|
biom-format
|
h5py
|
matplotlib
|
mudata
|
networkx
|
numpy
|
pandas
|
pooch
|
rdata
|
scikit-bio
|
scikit-learn
|
scipy
|
session-info2
|
threadpoolctl
|
treedata
|
xarray
Optional dependencies:
rpy2
|
torch
|
transformers
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