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Author:
EMBL Hamburg
Summary:
Pipeline allows massive screening using alphafold
Latest version:
2.11.0
Required dependencies:
absl-py
|
alphapulldown-input-parser
|
appdirs
|
biopython
|
dm-haiku
|
dm-tree
|
h5py
|
immutabledict
|
importlib-metadata
|
importlib-resources
|
ipython
|
ipywidgets
|
jupyterlab
|
matplotlib
|
ml-collections
|
ml-dtypes
|
nbformat
|
pandas
|
py3dmol
|
tensorflow-cpu
|
tqdm
|
typing-extensions
Optional dependencies:
colabfold-kernels
|
coverage
|
dm-haiku
|
jax
|
modelcif
|
numpy
|
openmm
|
parameterized
|
pdbfixer
|
pytest
|
pytest-cov
|
pytest-timeout
|
pytest-xdist
|
rdkit
|
tokamax
|
zstandard
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