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Author:
Mikhail Shugay
License:
GPL-3.0-or-later
Summary:
TCR/BCR repertoire analysis — Pgen/generation/inference, diversity, overlap, biomarkers (Python + C++)
Latest version:
5.1.0
Required dependencies:
arda-mapper
|
huggingface-hub
|
numpy
|
polars
|
scipy
|
seqtree
|
threadpoolctl
|
typer
|
vdjmatch
Optional dependencies:
anndata
|
awkward
|
marimo
|
matplotlib
|
mudata
|
nbsphinx
|
olga
|
pybind11
|
pydata-sphinx-theme
|
pytest
|
pytest-cov
|
pyyaml
|
ruff
|
sc-dandelion
|
scikit-learn
|
scirpy
|
sphinx
|
sphinx-copybutton
|
sphinx-design
|
tomli
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