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Author:
Skye Lane Goetz
Summary:
Tablassert turns biomedical spreadsheets (Excel, CSV, TSV) into knowledge graphs ready for NCATS Translator. Declare how your columns map to subject–predicate–object statements in YAML; Tablassert resolves free text to standard CURIEs, attaches provenance and statistical annotations, and emits KGX-compliant nodes and edges.
Latest version:
22.0.0
Required dependencies:
biolink-model
|
fastexcel
|
polars
|
pyarrow
|
pydantic
|
pyyaml
|
rapidfuzz
Optional dependencies:
aria2
|
cyclopts
|
loguru
|
polars
|
rich
|
scikit-learn
|
sentence-transformers
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