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Summary:
You want to wrap your best snakemake workflow to be easy install and run, Snakecdysis is for you !!!!! Tha aim of Snakecdysis is to easy-wrapped snakemake workflow as python package and then build sub-commands to manage this. !!!!!
Latest version:
2.0.1
Required dependencies:
click
|
cookiecutter
|
docutils
|
pandas
|
pulp
|
python-gitlab
|
pyyaml
|
snakemake
|
snakemake-executor-plugin-slurm
|
tqdm
Optional dependencies:
autodoc
|
autodocsumm
|
pandas
|
snakemake
|
sphinx
|
sphinx-click
|
sphinx_automodapi
|
sphinx_click
|
sphinx_copybutton
|
sphinx_design
|
sphinx_rtd_theme
|
sphinxcontrib-autoprogram
|
sphinxcontrib-napoleon
|
toml
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