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Author:
Farid Rashidi
Summary:
A python toolkit for single-cell tumor phylogenetic analysis
Latest version:
0.1.1
Required dependencies:
anndata
|
apted
|
biopython
|
click
|
cyvcf2
|
ete3
|
graphviz
|
ipython
|
joblib
|
legacy-cgi
|
matplotlib
|
natsort
|
networkx
|
numba
|
numpy
|
pandas
|
pybnb
|
pydot
|
python-sat
|
pyyaml
|
scikit-learn
|
scipy
|
seaborn
|
termcolor
|
tqdm
Optional dependencies:
bump-my-version
|
furo
|
ipykernel
|
ipython
|
memory-profiler
|
nbsphinx
|
nbsphinx-link
|
pre-commit
|
pydata-sphinx-theme
|
pyenchant
|
pypandoc
|
pytest-cov
|
pytest-xdist
|
sphinx
|
sphinx-autodoc-typehints
|
sphinx-click
|
sphinx-copybutton
|
sphinx-gallery
|
sphinx-paramlinks
|
sphinx-rtd-theme
|
sphinxcontrib-bibtex
|
truststore
|
typing-extensions
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