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Author:
None
Summary:
QuantMeta determines the absolute abundance of targets in metagenomes spiked with synthetic DNA standards. The tool accurately quantifies targets by establishing (1) entropy-based detection thresholds to confidently determine the presence of targets, and (2) an approach to identify and correct read mapping or assembly errors.
Latest version:
2.0.2
Required dependencies:
argparse
|
biopython
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matplotlib
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mutation-simulator
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numpy
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pandas
|
path
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scikit-learn
|
scipy
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seqtk
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