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Author:
None
License:
BSD 3-Clause License
Copyright (c) 2026 Michael Donovan
Redistribution and use in source and binary forms, with or without
modification, are permitted provide...
Summary:
A native Python port of R/Bioconductor phyloseq — PyData-native microbiome analysis
Latest version:
1.1.1
Required dependencies:
anndata
|
biom-format
|
h5py
|
networkx
|
numpy
|
pandas
|
plotnine
|
pyarrow
|
pyyaml
|
scikit-bio
|
scikit-learn
|
scipy
Optional dependencies:
hypothesis
|
interrogate
|
ipykernel
|
mkdocs-jupyter
|
mkdocs-material
|
mkdocstrings
|
mypy
|
nbconvert
|
nbformat
|
pandas-stubs
|
pre-commit
|
pytest
|
pytest-benchmark
|
pytest-cov
|
ruff
|
types-pyyaml
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