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Author:
Eshan Mitra, Ryan Suderman, Alex Ionkov, Jacob Neumann, Bill Hlavacek
Summary:
An application for parallel fitting of BioNetGen and SBML models using metaheuristics
Latest version:
1.8.1
Required dependencies:
bngsim
|
dask
|
distributed
|
libroadrunner
|
msgpack
|
numpy
|
paramiko
|
pydantic
|
pyparsing
|
scipy
|
tornado
Optional dependencies:
arviz
|
blackjax
|
bngsim
|
h5netcdf
|
h5py
|
hypothesis
|
jax
|
jaxlib
|
matplotlib
|
petab
|
pytest
|
pytest-xdist
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