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Author:
Csapó Bence, Galló Dominik, Uhlár Brigitta
License:
GPL-3.0-only
Summary:
The project is about using a pretrained protein transformer architecture to create embeddings of various proteins, and then performing nonlinear dimensionality reduction on those embeddings to see which kinds of similarities in protein function/structure we can restore
Latest version:
1.3
Required dependencies:
emd
|
fair-esm
|
matplotlib
|
nolds
|
numpy
|
pandas
|
pyqt5
|
pywavelets
|
scikit-learn
|
scipy
|
sphinx_rtd_theme
|
tqdm
Optional dependencies:
sphinx
|
sphinx_rtd_theme
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