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pen-stack


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Author: None
License: MIT
Summary: Open infrastructure for genome writing: the Writable Genome atlas, the Writer Atlas, and the Write Planner.
Latest version: 7.2.3
Required dependencies: click | lightgbm | numpy | pandas | pyarrow | pydantic | pyyaml | requests | scikit-learn | scipy | tqdm
Optional dependencies: beautifulsoup4 | biopython | bridgernadesigner | fastapi | fastmcp | gymnasium | litellm | mkdocs | mkdocs-material | paper-qa | paramiko | pybedtools | pybigwig | pysam | pytest | pytest-cov | python-dotenv | rich | ruff | sbol3 | scp | statsmodels | streamlit | torch | uvicorn | viennarna | xgboost

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