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Author:
Yiming Yang, Joshua Gould and Bo Li
Summary:
Pegasus is a Python package for analyzing sc/snRNA-seq data of millions of cells
Latest version:
1.10.2
Required dependencies:
adjusttext
|
anndata
|
cython
|
demuxem
|
docopt
|
hnswlib
|
igraph
|
joblib
|
leidenalg
|
lightgbm
|
loompy
|
matplotlib
|
natsort
|
numba
|
numpy
|
pandas
|
pegasusio
|
psutil
|
pybind11
|
scikit-learn
|
scikit-misc
|
scipy
|
seaborn
|
setuptools
|
statsmodels
|
threadpoolctl
|
umap-learn
|
wordcloud
|
xlsxwriter
|
zarr
Optional dependencies:
fitsne
|
forceatlas2-python
|
gseapy
|
harmony-pytorch
|
louvain
|
mkl
|
nmf-torch
|
pydeseq2
|
rpy2
|
scanorama
|
scvi-tools
|
torch
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