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Author:
Bert Bogaerts
Summary:
Workflow for whole genome sequencing based phylogeny of Illumina and ONT data.
Latest version:
1.1.0
Required dependencies:
beautifulsoup4
|
biopython
|
matplotlib
|
numpy
|
pandas
|
pulp
|
pyvcf3
|
pyyaml
|
setuptools
|
snakemake
|
upsetplot
|
yattag
Optional dependencies:
pytest
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